Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
1.000 CausalMutation disease CLINVAR [Clinical and molecular study of the Noonan syndrome]. 23513489 2012
Entrez Id: 23762
Gene Symbol: OSBP2
OSBP2
0.010 GeneticVariation disease BEFREE Zinc-finger nuclease-mediated homologous recombination revealed that correction of PTPN11 mutation in iPSCs with PTPN11 and OSBP2 mutations resulted in reduced CD34<sup>+</sup> cell generation to a level similar to that obtained with JMML iPSC colonies with the wild-type of both genes, and interestingly, to that obtained with normal iPSC colonies. 31222725 2019
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
1.000 GeneticVariation disease BEFREE YS EMPs expressing mutant PTPN11 demonstrate functional and molecular features of JMML but do not cause disease following transplantation nor following unperturbed development. 28975680 2017
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.400 GeneticVariation disease BEFREE With this quantification method, JMML patients with RAS mutations showed significantly higher GM-CSF sensitivity than JMML patients with PTPN11 mutations. 18164384 2008
Entrez Id: 5917
Gene Symbol: RARS1
RARS1
0.030 GeneticVariation disease BEFREE We will give only brief updates for aCML and RARS-T; JMML will be discussed in a separate article. 22195406 2011
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
1.000 GeneticVariation disease BEFREE We used patient-derived induced pluripotent stem cells (iPSCs) to characterize the signaling profiles and potential therapeutic vulnerabilities of PTPN11-mutant and CBL-mutant JMML. 29884903 2019
Entrez Id: 867
Gene Symbol: CBL
CBL
0.800 GeneticVariation disease BEFREE We think that some JMML patients with CBL mutation might show the good prognosis in later life after remission of JMML. 26911351 2016
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 AlteredExpression disease BEFREE We therefore analyzed samples obtained from 57 patients with a variety of hematologic malignancies (21, acute myelogenous leukemia; 14, acute lymphoblastic leukemia; 12, Philadelphia chromosome-positive chronic myelogenous leukemia [blast phase] or acute leukemia; 5, chronic lymphocytic leukemia; and 5, chronic myelomonocytic leukemia) for expression of interleukin-1 beta (IL-1 beta) and tumor necrosis factor-alpha (TNF-alpha) transcripts on Northern blots. 8417962 1993
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.020 AlteredExpression disease BEFREE We therefore analyzed samples obtained from 57 patients with a variety of hematologic malignancies (21, acute myelogenous leukemia; 14, acute lymphoblastic leukemia; 12, Philadelphia chromosome-positive chronic myelogenous leukemia [blast phase] or acute leukemia; 5, chronic lymphocytic leukemia; and 5, chronic myelomonocytic leukemia) for expression of interleukin-1 beta (IL-1 beta) and tumor necrosis factor-alpha (TNF-alpha) transcripts on Northern blots. 8417962 1993
Entrez Id: 81608
Gene Symbol: FIP1L1
FIP1L1
0.020 Biomarker disease BEFREE We tested its effectiveness against fusion tyrosine kinases TEL-platelet-derived growth factor receptorbeta (TEL-PDGFRbeta) and FIP1-like-1 (FIP1L1)-PDGFRalpha, which cause chronic myelomonocytic leukemia and hypereosinophilic syndrome, respectively. 16030188 2005
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.070 Biomarker disease BEFREE We tested its effectiveness against fusion tyrosine kinases TEL-platelet-derived growth factor receptorbeta (TEL-PDGFRbeta) and FIP1-like-1 (FIP1L1)-PDGFRalpha, which cause chronic myelomonocytic leukemia and hypereosinophilic syndrome, respectively. 16030188 2005
Entrez Id: 3207
Gene Symbol: HOXA11
HOXA11
0.010 GeneticVariation disease BEFREE We suggest the possibility that AML chemotherapy might be effective for treating JMML with t(7;11)(p15;p15) abnormality and NUP98-HOXA11 fusion. 19338047 2009
Entrez Id: 4928
Gene Symbol: NUP98
NUP98
0.030 GeneticVariation disease BEFREE We suggest the possibility that AML chemotherapy might be effective for treating JMML with t(7;11)(p15;p15) abnormality and NUP98-HOXA11 fusion. 19338047 2009
Entrez Id: 4763
Gene Symbol: NF1
NF1
1.000 GeneticVariation disease BEFREE We suggest that NF1 gene mutation does not occur frequently in JCML without NF1. 9691142 1998
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
1.000 GeneticVariation disease BEFREE We studied 71 children, including 28 with bone marrow monosomy 7 syndrome (Mo7), 35with juvenile chronic myelogenous leukemia (JCML), three with other forms of preleukemia, and five with acute myelogenous leukemia (AML), for activating mutations of KRAS and NRAS. 7949098 1994
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.800 GeneticVariation disease BEFREE We studied 71 children, including 28 with bone marrow monosomy 7 syndrome (Mo7), 35with juvenile chronic myelogenous leukemia (JCML), three with other forms of preleukemia, and five with acute myelogenous leukemia (AML), for activating mutations of KRAS and NRAS. 7949098 1994
Entrez Id: 1437
Gene Symbol: CSF2
CSF2
0.400 GeneticVariation disease BEFREE We screened RNA from six patients with JCML for mutations in the GM-CSF receptor (GM-CSFR) coding sequence using RT-PCR-SSCP. 9131005 1997
Entrez Id: 4893
Gene Symbol: NRAS
NRAS
0.800 GeneticVariation disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 867
Gene Symbol: CBL
CBL
0.800 GeneticVariation disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.050 Biomarker disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 613
Gene Symbol: BCR
BCR
0.070 Biomarker disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.100 GeneticVariation disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 171023
Gene Symbol: ASXL1
ASXL1
0.600 GeneticVariation disease BEFREE We screened 45 patients with chronic myelomonocytic leukemia (n = 39 patients, including seven with transformed-acute myeloid leukemia), MDS/MPN unclassifiable (n = 5), and atypical BCR-ABL1-negative CML (n = 1) for mutations in ASXL1, CBL, NRAS, and TET2 genes by molecular genetics including a sensitive next-generation sequencing (NGS) technique. 24164563 2014
Entrez Id: 6427
Gene Symbol: SRSF2
SRSF2
0.060 Biomarker disease BEFREE We resequenced SF3B1, U2AF35, and SRSF2 in 371 children with MDS or juvenile myelomonocytic leukemia. 22238327 2012
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
1.000 GeneticVariation disease BEFREE We report the first case of LIP in a patient with juvenile myelomonocytic leukemia (JMML) who was found to have a novel germline mutation of unknown significance in additional sex combs-like-1 (ASXL1) gene and a pathogenic somatic mutation of protein tyrosine phosphatase, nonreceptor type 11 (PTPN11) gene at diagnosis. 29023302 2018